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Am J Physiol Cell Physiol 295: C944-C953, 2008. First published July 30, 2008; doi:10.1152/ajpcell.00091.2008
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MEMBRANE TRANSPORTERS, ION CHANNELS, AND PUMPS

Functional characterization of NIPA2, a selective Mg2+ transporter

Angela Goytain,1 Rochelle M. Hines,2 and Gary A. Quamme1

1Department of Medicine and 2Department of Psychiatry, University of British Columbia, Vancouver, British Columbia, Canada

Submitted 15 February 2008 ; accepted in final form 28 July 2008


    ABSTRACT
 TOP
 ABSTRACT
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 GRANTS
 REFERENCES
 
We used microarray analysis to identify renal cell transcripts that were upregulated with low magnesium. One transcript, identified as NIPA2 (nonimprinted in Prader-Willi/Angelman syndrome) subtype 2, was increased over twofold relative to cells cultured in normal magnesium. The deduced sequence comprises 129 amino acids with 8 predicted transmembrane regions. As the secondary structure of NIPA2 conformed to a membrane transport protein, we expressed it in Xenopus oocytes and determined that it mediated Mg2+ uptake with two-electrode voltage-clamp and fluorescence studies. Mg2+ transport was electrogenic, voltage dependent, and saturable, demonstrating a Michaelis affinity constant of 0.31 mM. Unlike other reported Mg2+ transporters, NIPA2 was very selective for the Mg2+ cation. NIPA2 mRNA is found in many tissues but particularly abundant in renal cells. With the use of immunofluorescence, it was shown that NIPA2 protein was normally localized to the early endosomes and plasma membrane and was recruited to the plasma membrane in response to low extracellular magnesium. We conclude that NIPA2 plays a role in magnesium metabolism and regulation of renal magnesium conservation.

nonimprinted in Prader-Willi/Angelman syndrome


MAGNESIUM is essential for normal cell function, growth, and development. Cytoplasmic Mg2+ plays an important role in cellular metabolism and energy production reactions. Not surprisingly, intracellular magnesium deficiency leads to a number of clinical abnormalities that encompass cardiovascular and neurological disorders. Magnesium homeostasis is principally a balance between intestinal magnesium absorption and renal magnesium excretion (21). Urinary magnesium excretion is mainly controlled by passive paracellular reabsorption in the loop of Henle and active transcellular reabsorption in the distal convoluted tubule (DCT). Mg2+ uptake into DCT cells is mediated by the transient receptor potential melastatin proteins that comprise TRPM6 and TRPM7 channels (19, 26). Both TRPM6 and TRPM7 are nonselective cation transporters as they are permeable to both major divalent cations Ca2+ and Mg2+ but also many of the trace elements such as Zn2+, Mn2+, and Co2+ (19, 26, 30). Nevertheless, these transporters provide the basis for control of renal magnesium conservation as is evident from patients presenting with the hereditary disorder hypomagnesemia with secondary hypocalcemia (HSH). A mutation in TRPM6 results in loss of Mg2+ transport leading to excessive urinary magnesium-wasting and hypomagnesemia observed in HSH patients.

Renal magnesium handling is regulated, in part, by a large number of hormones and, in part, by differential gene expression leading to changes in expression of proteins mediating magnesium transport (8, 21). We have used the latter observation to design a strategy to identify novel gene products that are differentially expressed in response to magnesium and intimately involved in epithelial Mg2+ transport. Microarray analysis was used to determine gene transcripts that are upregulated in DCT cells with low extracellular magnesium concentration (11). To date, we have identified four novel membrane Mg2+ transporters with this approach (1115).

In the present study, we describe another family of Mg2+ transporters that was identified by its response to magnesium. The initial candidate gene selected conformed to NIPA2 (nonimprinted in Prader-Willi/Angelman syndrome) subtype 2 [variants: NM-030922, NM-001008860, NM-001008892, and NM-001008894] (2). In addition to NIPA2, the NIPA family comprise the paralogs NIPA1, NIPA3, and NIPA4 that have an overall similarity of about 40%. NIPA2 is located among about 30 imprinted genes linked to chromosome 15q11-q13 (SPG6 locus) involved in the Prader-Willi syndrome (4). Chai and colleagues (4) identified a number of genes in this region, one of which was the novel gene NIPA2. As NIPA2 encoded a putative polypeptide with nine transmembrane domains, they suggested that it might function as a receptor or transporter. Accordingly, it was of interest that NIPA2 was differentially upregulated by low magnesium in our microarray assays. To determine its function in the present study, we expressed NIPA2 cRNA in Xenopus oocytes and performed voltage-clamp and fluorescence studies to characterize encoded protein-mediated ion transport. The data indicate that NIPA2-mediated transport was highly selective to the Mg2+ as no other cation elicited transport in expressing oocytes. NIPA2 is only the second transporter reported that is selective for Mg2+. Furthermore, we have localized the NIPA2 protein to the early endosomes and have shown that cellular distribution is regulated by magnesium. This notion is consonant with our observations of other members of the NIPA family of proteins, but unlike NIPA2-mediated transport, NIPA1, NIPA3, and NIPA4 are not selective to Mg2+ (10).


    EXPERIMENTAL PROCEDURES
 TOP
 ABSTRACT
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 GRANTS
 REFERENCES
 
Oligonucleotide microarray analysis. Microarray analysis was performed according to the protocol recommended by Affymetrix and described previously (11). Poly(A)+ RNA was extracted with Poly(A) Pure (Ambion) from cells cultured in normal (0.8 mM) and low (nominally Mg2+-free) magnesium media. Twenty micrograms of RNA were used for cDNA synthesis followed by in vitro transcription. The cRNA was biotin labeled and fragmented, and the probes were hybridized to Affymetrix MG U74 Bv2 and MG U74 Cv2 arrays (Affymetrix) representing ~24,000 mouse transcripts. Detailed protocols for data analysis, documentation of sensitivity, reproducibility, and other aspects of the quantitative microarray analysis are those given by Affymetrix. Gene categorization was based on the NetAffx Database.

Genomic sequence analysis. The NIPA2 cDNA sequence was determined by standard methods (24). Data base searching and alignments were performed using BLAST. Protein homology searches were performed by comparing the amino acid query sequence against SWISSPROT data base. The full-length NIPA2 cDNA sequence has been deposited in the GenBank data base (accession human no. NM-030922, mouse no. NM-023647). The respective accession numbers were NIPA3, listed as NIPA-like (NPAL1) NM-207330, (AK014427) and NIPA4 (NIPAL2) NM-024759, and NM-145469.

Animal preparation and cell culture. Male mice were maintained for 5 days on a low-magnesium diet (ICN diet no. 902205, Nutritional Biochemicals) or on this diet supplemented with 0.05% MgSO4, which is comparable to normal mouse chow. The plasma concentrations were 0.13 ± 0.01 and 0.75 ± 0.09 mM, respectively, confirming that the mice consuming a magnesium-restricted diet were relatively magnesium deficient (27).

Mouse distal convoluted tubule (MDCT) cells were derived and immortalized by Pizzonia and colleagues (20). The MDCT cell line has been extensively used by us to study the hormonal and nonhormonal control of renal epithelial cell magnesium transport (8). Cells were grown in basal Dulbecco's minimal essential medium (DMEM)/Ham's F-12, 1:1, media (GIBCO) supplemented with 10% fetal calf serum (Flow Laboratories), 1 mM glucose, 5 mM L-glutamine, 50 U/ml penicillin, and 50 µg/ml streptomycin in a humidified environment of 5% CO2-95% air at 37°C. Where indicated, subconfluent MDCT cells were cultured in Mg2+-free media (Stem Cell Technologies) for 16 h before harvest. Other constituents of the Mg2+-free culture media were similar to the complete media.

Quantitative analysis of NIPA transcripts by real-time RT PCR. Total RNA of cells was extracted by TRIzol (Invitrogen). Genomic DNA contamination was removed by DNA-free kit (Ambion) before making first-strand cDNA. Standard curves were constructed by serial dilution of a linear pGEM-T vector (Promega) containing the NIPA2 gene. The primer set of mouse NIPA2 was the following: forward, 5'-ATGTGCCCGTTTGATACCAT-3' and reverse, 5'-TACAGGAGACAAGGTGACGCAA-3'. PCR products were quantified continuously with AB7000 (Applied Biosystems) using SYBR Green fluorescence according to the manufacturer's instructions. The relative amounts of NIPA2 mRNA were normalized to the mouse-actin transcripts. Similarly, the NIPA3 and NIPA4 transcripts were quantified with real-time RT PCR. The primers for NIPA3 were forward 5'-TGTATGTGGGCTTGGTATT-3' and reverse 5'-TTGCACTTATGAGAACGCT-3' and NIPA4 forward 5'-GCTTCGTCACCATCATCCT-3' and reverse 5'-TAGTCACCAAGGCTGTATCTC-3'.

Plasmid construction and generation of expression constructs. A mouse NIPA2 cDNA clone was purchased from RIKEN no. 3830408P04 and subcloned into the XbaI and SacII restriction sites of the pcms-GFP expression vector. Isolated clones were subcloned and sequenced to confirm sequence integrity. Standard protocols were used for Escherichia coli cloning procedures and DNA sequencing (24). NIPA3 (no. 3830408610) and NIPA4 (no. 953006K23) were purchased from RIKEN and processed in the same way as NIPA2.

In vitro transcription and expression of NIPA in xenopus oocytes. To synthesize complementary RNA (cRNA), the cDNA constructs were linearized and then transcribed with T7 polymerase in the presence of m7GpppG cap using the mMESSAGE MACHINE T7 (Ambion) transcription system. Xenopus oocytes were prepared and injected with cRNA, and electrophysiological recordings were preformed according to techniques previously described (11). Briefly, stage V–VI oocytes were treated with collagenase (2 mg/ml) for 2 h and manually defolliculated. Twenty-four hours after defolliculation, the oocytes were typically injected with 25 ng cRNA in 50 nl H2O. Oocytes were incubated at 18°C for 3–5 days in multiwell tissue culture plates containing Barth's solution [88 mM NaCl, 1.0 mM KCl, 2.4 mM NaHCO3, 1.0 mM MgSO4, 1.0 mM CaCl2, 0.3 mM Ca(NO3)2, 10 mM HEPES-NaOH, pH 7.6, 2.5 mM Na-pyruvate, 0.1% BSA, 10,000 U/l penicillin, and 100 mg/l streptomycin changed daily].

Electrophysiological studies. To record expressed membrane currents, oocytes were placed in a recording chamber (0.3 ml) and perfused with modified Barth's (96 mM NaCl, 10 mM HEPES-NaOH) containing various concentrations of MgCl2, as indicated, in substitution for osmotically equivalent amounts of NaCl. All experiments were performed at room temperature (21°C).

Steady-state membrane currents were recorded with the two-microelectrode voltage-clamp technique using a GeneClamp 500 amplifier interfaced to an IBM-compatible PC via a Digidata 1200 A/D converter and controlled by pCLAMP software (Axon Instruments). Electrophysiology consisted of a voltage-clamp step profile consisting of a holding potential of –15 mV, followed by eight episode series of +25-mV steps of 2 s duration, from –150 mV to +25 mV within an episode duration of 6.14 s. Each episode recorded 1,536 data points collected at 4-ms intervals. The data were filtered at the appropriate frequency before digitization. To assess the permeability of different divalent cations, we used the shift in the reversal potentials of the respective cation in relation to the reversal potentials observed for Mg2+ currents. Voltage-clamp episodes in the presence of extracellular test cations were corrected against episodes in the absence of external test cations.

To assess the permeability of different divalent cations, we used the shift in the reversal potentials of the respective cation from the reversal potentials of Mg2+ currents ({Delta}Erev) and calculated by the permeability (P) ratio by:

Formula
where R is the universal gas constant, T is absolute temperature, and F is the Faraday constant. Voltage-clamp episodes in the presence of extracellular test cations were corrected against episodes in the absence of external test cations.

Mean data (±SE) from the electrophysiology experiments are presented as Mg2+-evoked currents from four or more oocytes from the same batch of oocytes used on the same day. Each experiment was repeated at least twice on oocytes from different frogs. No Mg2+-evoked currents were detected in oocytes injected with water alone, demonstrating that the currents in NIPA2-producing oocytes were specific to the expressed transporter.

Measurement of Mg2+ influx. Epifluorescence microscopy was used to monitor changes in intracellular Mg2+ content within single oocytes using the Mg2+-responsive mag-fura-2 fluorescence dye (10). Oocytes were injected with 50 µM mag-fura-2 acid (Molecular Probes) 20 min before experimentation. The chamber (0.5 ml) was mounted on an inverted Nikon Diaphot-TMD microscope with a Fluor x10 objective and voltage clamped as described above. Subsequently, they were clamped at –70 mV for fluorescence measurements for the indicated times. Fluorescence was continuously recorded using a dual-excitation wavelength spectrofluorometer (Delta-scan, Photon Technologies) with excitation for mag-fura-2 at 340 and 385 nm (chopper speed set at 100 Hz), and emission at 505 nm. Results are presented as the 340/385 ratio, which reflects the Mg2+ concentration. All experiments were performed at 23°C. Each experiment was repeated at least three times using oocytes from different frogs.

Immunolocalization of NIPA2 protein in expressing oocytes. Oocytes were mounted in OCT cryostat medium and flash frozen in isopentane cooled in liquid nitrogen. Ten-micrometer thick sections were cut through frozen oocytes and mounted directly onto superfrost plus slides (Fisher). Sections were fixed in –20°C methanol and processed for immunohistochemistry using the hemagglutinin (HA) primary antibody and anti-rabbit Alexa 568 secondary antibody. Oocytes images were taken using a x20 dry objective affixed to a Zeiss LSM 510 Meta microscope and LSM Image software.

Subcellular localization of NIPA2 in MDCK and COS7 epithelial cells. A COOH-terminal HA tag was added to NIPA2 cDNA by PCR with an oligo(5N2Bg1: 5'-AGATCTGAACGAAATGAGCCTG-3', 3N2HA: 5'-CTAAGCCTAATCTGGAACATCGTATGGGTATCGTCGGAAAAAGATGGC-3') containing the full HA. NIPA2-HA was cloned into the pcDNA 3.1/V5-HIS TOPO TA expression vector (Invitrogen) resulting in the plasmid pcDNA-NIPA2-HA. The MDCK and COS7cells were grown to subconfluence on coverslips for 6 h and transfected with the plasmid using Lipofectamine 2000 for 5 h in Opti-MEM media (Invitrogen). After 14–16 h recovery in F-12 DMEM, the cells were fixed with 4% paraformaldehyde and immunostained with rat monoclonal anti-HA antibody (Roche) followed by Alexa Flour 568 goat anti-rat secondary antibody (Molecular Probes). Cells were washed three times with phosphate-buffered saline containing 0.3% Triton X-100 (PBST) before each antibody incubation. Primary antibodies of Rab5 (GTP-binding proteins) that were raised in the mouse (BD Transduction Labs) were used to localize the early endosomes. Phalloidin (Molecular Probes) was used to stain for actin in the indicated experiments to aid in delimiting membrane ruffles. Alexa 350 and Alexa 568 conjugated secondary antibodies were obtained from Molecular Probes. All antibody reactions were performed in blocking solution composed of 2% normal goat serum in PBST for 1 h room temperature. After staining was completed, coverslips were then mounted on slides with Fluoromount-G glycerol-based mounting media (Southern Biotechnology).

All images were taken using a x63 water lens affixed to a Zeiss LSM 510 Meta microscope and AxioVision (epifluorescent) software (512 x 512 pixel resolution; excitation 1, argon 488 nm at 10%; emission 1, Bandpass Filter 505–530; excitation 2, HeNe 543 nm at 40%; emission 2, Longpass Filter 560). Cells were selected from 10 to 12 fields of view and used for analysis of colocalization of antibody staining using Northern Eclipse software. Confocal imaging was used to assess the distribution of NIPA2-HA staining following alterations in culture media magnesium. Cells were selected from 5 to 10 fields of view and distribution was assessed using a line scan across the cell in the middle z-section using ImageJ software.


    RESULTS
 TOP
 ABSTRACT
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 GRANTS
 REFERENCES
 
NIPA2 is a magnesium-responsive gene. With the knowledge that differential gene expression is involved with selective control of epithelial cell magnesium conservation, our strategy was to use microarray analysis to identify cDNAs that were upregulated with low magnesium (11). Because our objective was to identify novel transport proteins, we prioritized these candidates according to characteristics of hypothetical transporters. One of the selected cDNA fragments identified by an increase in transcript was NIPA2 (Mus musculus hypothetical protein MNCb-2146, renamed Nipa2). We confirmed the microarray data using real-time RT-PCR. NIPA2 mRNA was increased 2.4 ± 0.2-fold change in MDCT cells, n = 11 independent preparations, cultured in low-magnesium compared with cells grown in normal magnesium and 2.2 ± 0.1-fold change in kidney tissue harvested from mice maintained on magnesium-restricted diet relative to control diets (Fig. 1C). NIPA3 and NIPA4 mRNAs increased 2.9 ± 0.2-fold and 2.8 ± 0.5-fold, respectively, in kidney tissue harvested from mice maintained on magnesium-restricted diet.


Figure 1
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Fig. 1. Amino acid sequences of the mouse nonimprinted in Prader-Willi/Angelman syndrome (NIPA) family. A: amino acid sequences of mouse NIPA2 protein are aligned with that of mNIPA3, mNIPA4, and mNIPA1. Identical amino acids sequences are indicated in bold relative to NIPA2. Predicted transmembrane segments are shaded. Membrane topology was predicted by the SOSUI program based on Kyte-Doolittle hydrophobicity analysis. B: phylogenetic tree constructed from a multiple alignment of the following Homo sapiens (h), Mus musculus (m), Rattus norvegicus (r), Gallus gallus (g), Pan troglodytus (pt), Pongo pygmaeus (p), bos taurus (b), and canis familiaris (c) sequences. Phylogenetic profiling was performed using PhyloDraw. C: real-time reverse transcription PCR analysis of NIPA2, NIPA3, and NIPA3 mRNA in kidney tissue harvested from mice maintained on normal magnesium diet and magnesium-restricted diet. Murine NIPA2 and β-actin mRNA was measured with real-time RT PCR (AB7000, Applied Biosystems) using SYBR Green fluorescence. Standard curves for NIPA2 and β-actin were generated by serial dilution of each plasmid DNA. The expression levels of the NIPA transcripts of magnesium-deficient mice were normalized to that of the respective normal mouse transcript measured on the same 1.0-µg RNA sample.

 
Characterization of the NIPA gene family. Chai and coworkers (4) have mapped and characterized NIPA1 and NIPA2 as tandem genes in the BP1-BP2 region of human 15q11-q13 and their respective orthologs in mouse chromosome 7B3. A full-length NIPA2 cDNA representing 2,588 bp in human and 3,626 bp in mouse spanning exons 1–8 was assembled in silico (Fig. 1A). NIPA2 is highly conserved among vertebrates. Northern blot analysis demonstrated a single 2.4-kb transcript in human and two 1.9-kb and 3.2-kb mRNA isoforms in the mouse. The similarity between the full-length human and mouse NIPA2 cDNA is 96% with a 96% amino acid identity. Hydrophobicity plots using the membrane topology using the SOSUI program predicted eight transmembrane helices. Using the TMHMM (version 2.0) program, Chai et al. proposed nine transmembrane regions (4). Based on the secondary structure, Chai et al. (4) postulated that NIPA1 and NIPA2 form membrane receptors or transporters. The secondary structure conformed to our criteria for a putative membrane transporter so that we selected it for further study.

An in silico search identified two related genes: NIPA3 and NIPA4. NIPA2, NIPA3, and NIPA4 have greater amino acid similarity, about 66%, than they have with NIPA1 (Fig. 1A). NIPA1 is the least similar member of the family even though it is located in tandem with NIPA2 on human chromosome 15q and mouse 7B. The human NIPA1 and mouse NIPA1 exhibited between 36% and 43% identity to the other three respective human and mouse NIPA forms. Genes encoding close homologues (83%-91% amino acid sequence identity) are present in the chicken, orangutan, and chimpanzee genomes, indicating that divergence of the NIPA1 from NIPA2, NIPA3, and NIPA4 forms was an early event in vertebrate evolution (Fig. 1B). NIPA3 is located on human chromosome 4p12 and mouse 5 chromosome. NIPA4 is on human chromosome 5q33 and on mouse 11. Because NIPA3 and NIPA4 are similar to NIPA2, we thought it prudent to test these proteins for transport function.

NIPAs mediate Mg2+ transport in expressing Xenopus oocytes. To determine whether NIPA2 encodes a functional Mg2+ transporter, we prepared cRNA, injected it into Xenopus oocytes, and characterized Mg2+ transport using two-microelectrode voltage-clamp analysis and fluorescence measurements. The electrophysiological data gave evidence for a rheogenic process with inward currents in NIPA2 cRNA-injected oocytes, whereas there were no appreciable currents in control H2O- or total poly(A)+RNA-injected cells from the same batch of oocytes (Fig. 2A). The reversal potential was significantly shifted to the right with increases in magnesium concentration as would be expected of a Mg2+ transporter (Fig. 2A). In support of this conclusion, we performed flux studies with fluorescence spectrometry using the Mg2+-sensitive dye mag-fura-2 (10). Currents were initially measured at resting potentials with the oocytes in Mg2+-free solutions and then in solutions containing 2.0 mM MgCl2. Oocytes were subsequently voltage clamped at –70 mV (Fig. 2B). Fluorescence was determined throughout the experiment. The 340/385 fluorescence ratio, a reflection of the free Mg2+ concentration within the oocyte, increased in NIPA2-expressing oocytes but not in the control water-injected oocytes (Fig. 2B). The increase in cytosolic Mg2+ concentration with time (Mg2+ flux rate) was linearly associated with the simultaneously measured currents, indicating that the Mg2+-elicited currents was due to the movement of Mg2+ cations. In these experiments a number of oocytes expressing variable amounts of NIPA2 protein were clamped at –70 mV, and the mag-fura-2 340/345 ratio and electrical currents were simultaneously measured (Fig. 2C). The increase in cytosolic Mg2+ concentration observed after readdition of extracellular Mg2+, taken as an index of plasma membrane Mg2+ transport, was linearly associated with the simultaneously measured currents, consistent with the concept that the Mg2+-elicited currents were due to the movement of Mg2+. Consistent with the prediction from early studies that apical Mg2+ uptake is not energy dependent, NIPA2-mediated transport did not appear to be coupled to Na+, Cl, or H+. Substitution of Na+ or Cl with choline or cyclamate, respectively, did not alter NIPA2-mediated currents (data not shown). Acid pH diminished Mg2+ uptake in a manner opposite to what would be expected if Mg2+ was coupled to H+ (data not shown). Also consistent with ionic transport was the observation that mouse NIPA2-mediated Mg2+ uptake was saturable with a demonstrated mean Michaelis constant (Km), which was 0.31 ± 0.07 mM, n = 29 (Fig. 1D). As the extracellular Mg2+ concentration is in the order of 0.5 mM, the affinity of NIPA2-mediated transport is consistent with a physiological role in cellular Mg2+ metabolism.


Figure 2
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Fig. 2. Mg2+-evoked currents in Xenopus oocytes expressing NIPA2 RNA transcripts. A: current-voltage (I-V) relationships obtained from linear voltage steps from –150 mV to +25 mV in the presence of Mg2+-free solutions or those containing the indicated concentrations of MgCl2. Oocytes were clamped at a holding potential of –15 mV and stepped from –150 mV to +25 mV in 25-mV increments for 2 s sweeps at each of the concentrations indicated. Shown are average I-V curves obtained from control H2O-injected (n = 3) or NIPA2-expressing (n = />3) oocytes. Note, the positive shift in reversal potential with increments in magnesium concentration. Values are means ± SE of observations measured at the end of each voltage sweep for the respective Mg2+ concentration. B: Mg2+ flux into NIPA2-expressing oocytes. Currents were measured in control and NIPA2-expressing oocytes, at resting potentials, in solutions consisting of nominally magnesium-free solutions, and then with 2.0 mm MgCl2 with interruption as indicated. Oocytes were subsequently voltage clamped at a holding potential of –70 mV, where indicated. Mg2+ fluxes were determined with fluorescence using the Mg2+-sensitive dye, mag-fura-2. Results are presented as the 340-to-385 excitation ratio that reflect changes in divalent cation concentration. MnCl2 (2.0 mM) was added and removed where indicated. Quenching of intensity at both excitation wavelengths of 340 nm and 385 nm with Mn2+ would be expected if it was transported by NIPA2. Results are mean of tracings performed with three different oocyte preparations. C: association of Mg2+ flux with the simultaneous measured transmembrane currents determined at –70 mV. The change in Mg2+ concentration, 340/385 ratio, was measured in different oocytes with the shown holding current. D: summary of concentration-dependent Mg2+-evoked currents in NIPA2-expressing oocytes using a holding potential of –125 mV. A Michaelis constant (Km) of 0.31 mM was determined with nonlinear regression analysis. E: substrate specificity of NIPA2 following application of test cations 2.0 mM CaCl2 or 0.2 mM of the indicated cation. Oocytes were clamped at a holding potential of –15 mV and stepped from –150 mV to +25 mV in 25-mV increments for 2 s for each of the cations. Values are means ± SE of currents measured at the end of each voltage sweep for the respective divalent cation. F: inhibition of Mg2+-evoked currents with 0.2 mM test cation, except Ca2+, which was tested at 5.0 mM in the presence of external 2.0 mM Mg2+. The inhibitor was added with MgCl2 and voltage clamp was performed about 5 min later. Only Gd3+, Mn2+, Ni2+, and Cd2+ inhibited NIPA2-mediated Mg2+ transport. G: surface expression of NIPA2 protein in X. laevis oocytes determined with NIPA2-HA immunofluorescence. H: absence of NIPA2 protein in control water-injected oocytes.

 
A variety of divalent cations were used to determine the selectivity of the expressed NIPA2-mediated Mg2+ transport. Ca2+ (2.0 mM) or Sr2+, Ba2+, Fe2+, Cu2+, Mn2+, Ni2+, Co2+, Zn2+, or Cd2+ (determined with 0.2 mM cation concentration) did not produce appreciable currents in the absence of Mg2+ in NIPA2-expressing oocytes (Fig. 1E). Fluorescence measurements supported the electrophysiological findings in that the mag-fura-2 signal quenching cation Mn2+ did not alter fluorescence at both 340- and 385-nm excitation wavelengths, clearly indicating that Mn2+ was not transported by NIPA2 (Fig. 1B). We conclude that NIPA2 is highly selective for the divalent Mg2+ cation.

We then determined whether these cations would inhibit Mg2+-evoked currents. The apparent potency sequence of inhibition was Cd2+, 2% (IMg2+ in the presence of 0.2 mM putative inhibitor as a percentage of control IMg2+ in the absence of inhibitor for each oocyte); Ni2+, 3%; Mn2+, 4%; and Gd3+, 7% (Fig. 1F). The other cations tested did not significantly effect Mg2+-evoked currents. Accordingly, although NIPA2-mediated transport was very selective for Mg2+, it may be inhibited by relatively large concentrations of some metals.

Immunofluorescence using an HA antibody shows predominantly surface localization of NIPA2-HA protein in NIPA2-expressing oocytes (Fig. 2G), whereas there was no staining in control, water-injected oocytes (Fig. 1H).

Using the same approaches, we showed that NIPA3 and NIPA4 also mediated Mg2+ transport (Fig. 3). Both transporters were rheogenic, voltage dependent, and saturable with Km values of 0.90 ± 0.08 and 0.36 ± 0.02 mM, respectively (Fig. 3, A and B). NIPA3 transported Mg2+, 100%; Sr2+, 62% (relative to Mg2+); Ba2+, 51%; Fe2+, 32%; Mn2+, 32%; Cu2+, 20%; Co2+, 20%, and NIPA4 transported Mg2+, 100%; Ba2+, 49%; Sr2+, 39%; Mn2+, 32%; Co2+, 20% (Fig. 3E). Accordingly, NIPA3 and NIPA4 are able to mediate the transport a number of divalent cations in addition to Mg2+. It should be noted that these apparent permeabilities were determined in the absence of Mg2+ and at relatively large concentrations. None of the NIPA family members mediated Ca2+ transport nor was Mg2+ uptake inhibited by Ca2+. In summary, NIPA2 was selective for Mg2+, whereas NIPA3 and NIPA4 mediated the transport of a number of other cations.


Figure 3
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Fig. 3. Mg2+-mediated transport into Xenopus oocytes expressing NIPA3 and NIPA4 proteins. A: I-V relationships obtained from linear voltage steps from –150 mV to +25 mV in the presence of Mg2+-free solutions or those containing the indicated concentrations of MgCl2. Oocytes were clamped at a holding potential of –15 mV and stepped from –150 mV to +25 mV in 25-mV increments for 2 s sweeps at each of the concentrations indicated. Shown are average I-V curves obtained from control H2O-injected (n = 3) or NIPA3-expressing (n = />3) oocytes. Values are means ± SE of observations measured at the end of each voltage sweep for the respective Mg2+ concentration. B: Mg2+ flux into NIPA3-expressing oocytes. Currents were measured in control and NIPA3-expressing oocytes, at resting potentials, in solutions consisting of 2.0 mM MgCl2. Oocytes were subsequently voltage clamped at a holding potential of –70 mV where indicated. Mg2+ fluxes were determined with fluorescence using the Mg2+-sensitive dye, mag-fura-2. Results are presented as the 340-to-385 excitation ratio determined with 505-nm emission. Where indicated MgCl2 was removed and 2.0 mM CaCl2 added to the bathing solution. Results are mean of tracings performed with 5 different oocyte preparations for each study. C: I-V relationship of NIPA4-mediated currents in expressing oocytes. Methods were those given in A. D: Mg2+ flux into NIPA4-expressing oocytes. Methods were those given in B. E: summary of substrate specificity of NIPA1-4 following application of Ca2+, 2.0 mM, and other test cations, 0.2 mM, in the absence of external Mg2+. Oocytes were voltage clamped as given in A with each of the divalent cations indicated. Values are means ± SE of permeability ratios, based on the change in reversal potential (Erev), measured at the end of each voltage sweep for the respective divalent cation. Values for NIPA1 were previously reported and are given here for comparison to NIPA2-4 (10).

 
Cellular localization of NIPA2. Using Northern blot analysis, Chai et al. (4) reported that NIPA2 transcripts were present in many tissues, including the heart, brain, lung, liver, small intestine, and pancreas but were particularly abundant in the placenta and kidney. Our measurements with real-time RT-PCR analysis confirmed the wide-spread distribution of transcript with the highest NIPA2 mRNA in the kidney (data not shown).

To investigate the subcellular localization of NIPA2 protein, we constructed a tagged NIPA2-HA, transfected in MDCK and COS7 cells, and performed immunofluorescence using the specific antibody to HA (Fig. 4). In normal transfected MDCK cells, the NIPA2-HA-fusion protein was predominately localized with Rab5, indicting that it was an early endosome protein (Fig. 4A). Furthermore, the punctate peripheral staining pattern of NIPA2-HA is consistent with the presence of NIPA2 in early endosomes. In addition to the endosomal localization, NIPA2-HA staining was widely dispersed across the cell surface at the membrane ruffles as evidenced by phaloidin staining of actin (Fig. 4E). This pattern of distribution is consistent with the notion that NIPA2 translocates via the early endosomes to the plasma membrane. The suggestion that endogenous NIPA2 is present at the surface membrane is in keeping with the functional studies performed with heterologous-expressing oocytes.


Figure 4
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Fig. 4. Subcellular localization of NIPA2 protein and redistribution of NIPA2 with changes in media magnesium. A: NIPA2-HA-transfected MDCK cells were fixed and incubated with HA antibody. MDCK cells were cultured in normal magnesium 0.8 mM (indicated as Normal Magnesium) or low magnesium, nominally magnesium-free (indicated as Low Magnesium) for 12 h where indicated. B: localization of Rab5, an early endosome marker. C: merge of NIPA2 with Rab5. D: cells stained with phaloidin to delineate the cell surface. E: merge of NIPA2 staining with phaloidin. Note the apparent increase in NIPA2-HA protein on the peripheral surface in cells cultured in low magnesium relative to normal cells. F: summary of NIPA2-HA accumulation within the cell in response to changes in magnesium. G: summary of NIPA2-HA accumulation at the peripheral membrane in response to changes in magnesium. Images are representative of more than 25 individual cells on three separate preparations.

 
We further determined the distribution of NIPA2-HA protein in response to changes in external magnesium concentration. MDCK cells were cultured in nominally magnesium-free media for 12 h, and subcellular localization was determined with immunofluorescence as given above. The evident changes in NIPA2-HA subcellular distribution occurred within the early endosomes and the surface membrane (Fig. 4). Placing the cells in low magnesium for 12 h lead to an increase in NIPA2-HA protein in the early endosome pool (Fig. 4F). Moreover, there was a diffusive recruitment of NIPA2-HA protein to the surface membrane that was apparent at 12 h after removal of magnesium (Fig. 4G). Indeed, the surface labeling with NIPA2-HA was so extensive that the cell outline was evident, suggesting that it was forming in the plasma membrane. Similar findings were observed in COS7 cells (data not shown). NIPA2-HA was apparent in the early endosomes and plasma membrane of normal cells and following magnesium depletion, there was an evident increase in protein in the surface membrane.


    DISCUSSION
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 ABSTRACT
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
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Although Mg2+ is an essential cation in cellular metabolism, little is known about how Mg2+ enters the cell and intracellular organelles to participate in the many Mg2+-dependent biochemical reactions. We have used the observation that renal magnesium conservation is controlled in part by differential gene expression to design a strategy to identify novel gene products that are intimately involved in epithelial magnesium transport (21). Microarray analysis was used to determine gene transcripts that are upregulated with low extracellular magnesium concentration (11). The first family of genes identified encoded novel magnesium transporters that we have termed MagT (11). This family comprises two members: MagT1 and N33. MagT1 is characterized by a very rigid substrate specificity in that it mediates only Mg2+ transport, whereas N33 is more permissive as it transports Cu2+ and Fe2+ as well as Mg2+ (unpublished observations). Another family of Mg2+ transporters identified by differential gene expression was the solute carrier (SLC41) family of proteins comprising three gene products SLC41A1-3 (12, 13). The three SLC41 members mediate the uptake of a number of cations in addition to Mg2+. A third family of transporters, initially named the ancient conserved domain protein (ACDP) family was also found to be differentially expressed in response to magnesium, and ACDP has been shown to mediate Mg2+ transport (14). Members of the ACDP family of Mg2+ transporters have a low substrate specificity and accepts a wide variety of divalent cations. More recently, we have identified a novel family that we have termed MMgT (15). As with most other Mg2+ transporters, MMgT1 and MMgT2 transport a number of divalent cations. In summary, based on the knowledge that renal magnesium reabsorption is regulated, in part, by differential gene expression, we have used microarray analysis to identify four families of mammalian Mg2+ transporters in renal epithelial cells. It is obvious that our use of microarray analysis to identify differentially regulated genes is useful in determining here-to-fore unknown and uncharacterized Mg2+ transporters.

Based on our present studies, we conclude that the undefined orphan NIPA2 protein is a transporter that mediates selective Mg2+ flux. Expression of NIPA2 in Xenopus oocytes produces Mg2+-evoked currents with channel-like properties measured with voltage-clamp conditions. The reversible potential shifts to the right with a magnitude of 28 mV as predicted by the Nernst relationship with decade increases in magnesium concentration (11). Mg2+ currents are concentration dependent, saturable, reversible, and inhibitable as would be expected of a cationic transporter. In support of the electrophysiological findings, NIPA2 mediates only Mg2+ flux as determined by fluorescence with the Mg2+-sensitive mag-fura-2 dye. These two independent approaches resulted in the same conclusion. The evidence that NIPA1 is a selective Mg2+ transporter is persuasive.

Within the cell, the NIPA2 was principally localized to the early endosomal compartment and the peripheral surface. This localization suggests that the NIPA2 protein plays a role at the surface membrane. In support of this notion is the redistribution of NIPA2 in response to magnesium. There was an apparent trafficking of NIPA2 to the periphery with low magnesium. Consonant with the mRNA analysis, there was an apparent increase in total protein in epithelial cells grown in low magnesium and an apparent clustering of NIPA2 protein in early endosomes giving a punctate appearance. These changes in protein expression likely account, in part, for the associated changes in Mg2+ transport.

By similar methods, we have recently showed that NIPA1, the NIPA2-related gene to NIPA2 within the 15q11-q13 chromosome region, is also a Mg2+ transporter (10). Both NIPA1 and NIPA2 locate to the early endosomes and plasma membrane. Although there are functional similarities between NIPA2 and NIPA1, there are some remarkable differences between currents mediated by these proteins. First, both NIPA1- and NIPA2-mediated transport is saturable but the Michaelis constants differed; NIPA1 was 0.66 ± 0.08 mM compared with NIPA2, 0.31 ± 0.07 mM. Second, the substrate specificity of the two transporters are different in that NIPA2 is very specific for Mg2+, whereas NIPA1 transported Sr2+, Fe2+, and Co2+albeit to a much less extent than Mg2+ (10). In summary, NIPA1 is more permissive in substrate specificity than NIPA2. It is unknown whether these divergent electrophysiological properties translate into differences in intracellular function. As NIPA1 and NIPA2 genes are in tandem on chromosome 15q, they are likely paralogs; unlike orthologs that commonly retain the same function in the course of evolution, paralogs evolve new functions, albeit related to the original one. Accordingly, it is of interest that NIPA2 possesses different properties to NIPA1 but they both mediate Mg2+ transport. The relationship of NIPA1 to NIPA2 remains to be determined. As remarked by Chai and colleagues (4), both NIPA1 and NIPA2 polypeptides each display 98% identity between the respective human and mouse orthologs, and these have a 55% identity to the respective Fugu NIPAs, but there is only 32–36% identity between NIPA1 and NIPA2 in each of the species. NIPA2 shows greater common identity in its ancestral invertebrate polypeptides than it does to NIPA1. The phylogenetic distance between NIPA1 and NIPA2 paralogs is as great as that between the orthologs. This observation led Chai et al. (4) to suggest that NIPA1 and NIPA2 have evolved related but different functions. However, both NIPA1 and NIPA2 transcripts and proteins are upregulated with low magnesium indicating similar regulation of the individual gene products, suggesting that they are somehow involved in Mg2+ metabolism. Thus it was of interest that both NIPA1 and NIPA2 localize to the early endosomes and the plasma membrane. Mutations in NIPA1 (SPG6 locus) have been shown to be the basis of autosomal dominant hereditary spastic paraplegia (HSP) [OMIM no. 608145 [OMIM] , no. 600363] (4, 5, 9). Two missense NIPA1 mutations, G100R and T45R, have been reported to be the basis of HSP (22, 23). We have shown that these mutations lead to a loss-of-function of NIPA1 suggesting that G100 and T45 sites are important, if not essential, in processing of the NIPA1 Mg2+ transport protein (10). Heterologous expression in COS7 cells demonstrate that these mutants were retained in the endoplasmic reticulum rather than trafficking to the plasma membrane. Moreover, Gly106 and T45 are conserved among ortholog NIPA1 channels supporting the notion that the mutation is strongly pathogenetic. There are no similar consensus sites in the other members of the NIPA family, either the paralog NIPA2 or the related NIPA3 and NIPA4 transporters, so that protein folding is likely different between these transporters. Because the disruption of NIPA1 led to neuropathy in the HSP patients where NIPA2 is presumably normal, NIPA2 cannot functionally replace NIPA1. This might be related to their additional expression in other compartments or so-far-unknown functional differences.

Of the Mg2+ transporters identified to date, only MagT1 and NIPA2 are selective for Mg2+. The other identified mammalian proteins (Mrs2, TRPM6/7, SLC41, ACDP, and MMgT) transport a variety of divalent metals including in some cases Ca2+ (12, 14, 15, 19, 26, 30, 31). Interestingly, the other members of the MagT and NIPA families are not cationic selective. The second member of the MagT family, N33, mediates Mg2+, Fe2+, Cu2+, and Mn2+. In addition to Mg2+, NIPA1 transports Sr2+, Co2+; NIPA3 transports Sr2+, Ba2+, Fe2+, Cu2+; and NIPA4 transports Sr2+, Ba2+ (Fig. 3E). Thus substrate selectivity of the identified Mg2+ transporters cannot be predicted by phylogenetic profiling (Fig. 1B) nor does evolutionary divergence predicate Mg2+ selectivity. Moreover, there are no obvious similarities in the secondary amino acid structures of MagT1 and NIPA2, suggesting that there are different means of making a selective Mg2+ transporter.

Prader-Willi syndrome [MIM 176270 [OMIM] ] is a genetic disorder, affecting 1 in 15,000 newborns, that presents as a complex developmental and multisystem disorder. It is characterized by infantile hypotonia, gonadal hypoplasia, moderate mental retardation, short statue, obsessive/compulsive behavior, feeding problems, and later hyperphagia leading to obesity (2, 3, 17). At least 12 imprinted genes have been identified in the 15q11-q13 region that are candidates for Prader-Willi syndrome. Angelman syndrome [MIM 105830 [OMIM] ] also maps to 15q-q13 but is now thought to be caused by a single maternally expressed gene (UBE3A) and is a clinically distinct neurological disorder from Prader-Willi syndrome (16). The role of NIPA2 in the etiology of Prader-Willi syndrome is obscure. Prader-Willi patients do not have a single gene mutation, suggesting that it is a contiguous gene syndrome resulting from the loss of function of several paternally expressed, maternal uniparental disomy, or imprinted genes (1, 6, 29). Although NIPA1 and NIPA2 reside within a cluster of expressed genes in chromosome 15q11–13 that are thought to cause the Prader-Willi phenotype, there is no evidence that they are directly involved with the many complexities of this disorder (17, 18). There are a number of mouse models of Prader-Willi that demonstrate similar phenotypes of severe failure-to-thrive and early postnatal lethality, but studies of these models have not directly implicated NIPA1 and NIPA2 in the disorder (28). Stefan et al. (28) generated a transgenic mouse model of Prader-Willi syndrome (designated TgPWS) that has a deletion of 13 known imprinted and 10 nonimprinted genes including NIPA2. Microarray analysis of the brains to ascertain the primary transcriptional changes failed to demonstrate a change in NIPA1 and NIPA2 expression leading these authors to conclude that these were unlikely to be involved in this disorder (28). Further studies are warranted to determine role of NIPA2 in Prader-Willi syndrome and the disturbances, if any, of cellular magnesium metabolism in this disorder.

In summary, we show here that NIPA2 is a very selective Mg2+ transporter. NIPA2 protein is localized to the early endosomes/plasma membrane and is differentially increased with low magnesium. NIPA2 is only one-of-two selective Mg2+ transporters that have been reported in the mammalian cell.


    GRANTS
 TOP
 ABSTRACT
 EXPERIMENTAL PROCEDURES
 RESULTS
 DISCUSSION
 GRANTS
 REFERENCES
 
This work was supported by research grants to G. A. Quamme from the Canadian Institutes of Health Research (CIHR), MOP-53288. R. Hines is supported by studentships from CIHR and MSFHR.


    ACKNOWLEDGMENTS
 
We acknowledge the BioImaging Facility at the University of British Columbia for the oocyte images.


    FOOTNOTES
 

Address for reprint requests and other correspondence: G. A. Quamme, Dept. of Medicine, Vancouver Hospital, Koerner Pavilion, 2211 Wesbrook Mall, Vancouver, BC, Canada V6T 1Z37 (e-mail: quamme{at}interchange.ubc.ca)

The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.


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