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SPECIAL SECTION ON MITOCHONDRIAL MODELING AND FUNCTION
1Carolinas Neuromuscular/ALS-MDA Center, Carolinas Medical Center, Charlotte, North Carolina; and 2Center for Neurodegenerative Disease, and 3Free Radicals in Medicine Core, Division of Cardiology, Emory University, Atlanta, Georgia
Submitted 24 April 2006 ; accepted in final form 11 October 2006
| ABSTRACT |
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permeability transition; reactive oxygen species generation; interspecies difference
Experiments with isolated rat liver mitochondria (RLM) (12) and cultured hepatocytes (12, 31) have shown that peroxides, such as tert-butyl hydroperoxide (t-BOOH), promote mitochondrial PT (mPT) even in the presence of very small amounts of Ca2+. The current view is that oxidative stress plays an important role in promoting the Ca2+-induced mPT (12, 62), and t-BOOH was regarded as a useful tool to study the effects of oxidative stress on mitochondrial functions (12, 31). It was suggested that increased oxidative stress may be an important factor in pathogenesis of neurodegenerative diseases, such as Parkinson's disease (40), amyotrophic lateral sclerosis (47), and Huntington's disease (HD) (46).
The progress in studies of neurodegenerative diseases, such as HD and amyotrophic lateral sclerosis, was also promoted by creation of genetically engineered animal models of these diseases (reviewed in Ref. 65), and by introduction of the in vivo toxic models of Parkinson's disease (5, 14, 40) and HD (9). However, the animal models of the diseases revealed a basic problem: different species respond differently to the pathological agents used in the in vivo models of neurodegenerative diseases (20, 48). Besides, recent experiments have shown that during systemic intoxication with rotenone, the brain mitochondria were severely damaged, whereas liver mitochondria remained virtually unaffected (40).
Thus several fundamental questions arise that have to be answered to successfully use the toxic and genetic animal models of neurodegenerative diseases. Some of the uncertainties stem from the trivial fact that most of our current knowledge about mitochondrial functions, permeability transition in particular, was obtained in experiments with mitochondria from rat tissues, predominantly the liver. The genetic models of neurodegenerative diseases are, however, usually created with mice and involve studies of tissues other than liver.
The first question to consider examines the extent to which brain mitochondria are different from liver mitochondria. There is no consensus in this respect in the literature. The published respiratory activities for brain mitochondria may differ >10-fold, whereas some authors failed to find any difference in respiratory activity between liver and brain mitochondria (3, 64). However, it was also found that compared with rat liver mitochondria, rat brain mitochondria are not sensitive to a damaging effect of hydroperoxides (27), do not produce ROS such as superoxide (15, 54) and nitric oxide (30), or, on the contrary, generate more ROS than other tissue mitochondria (11). There are indications that brain mitochondria are less sensitive to a damaging effect of Ca2+ (27), and are less sensitive to the protective effect of cyclosporin A during calcium loads (39).
The second question regards the species differences in mitochondrial functions. There were reported species-specific differences in state 4 (resting respiration) respiratory rates, which depend on intrinsic proton conductivity of mitochondria, and thus determine the standard metabolic rate of an animal. Some of these differences were related to the size of the animals (8). To successfully use animal models of diseases, we have to understand the nature of these species-specific differences in mitochondrial functions. It is well established that responses of animals to pathological agents are genotype dependent (20, 48). However, little is known how these diversities are translated at the functional level in different organs. Because mPT and ROS production are thought to play important roles in neurodegeneration it was logical to focus our attention on these two mitochondrial functions.
Thus the purpose of this work was to study organ-specific and species-specific differences between rat and mouse liver and brain mitochondria in their major functions, namely permeability transition (PT) and generation of ROS. The abnormalities of these functions may contribute to the pathogenesis of neurodegenerative diseases, and the differences in the relationships between mPT and ROS generation in rats and mice may underlie the species-specific diversity in animal models of neurodegenerative diseases.
| MATERIALS AND METHODS |
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Isolation of the liver and brain mitochondria. Both liver and brain mitochondria were isolated in medium that contained (in mM) 225 mannitol, 75 sucrose, 20 MOPS (pH 7.2), 1 EGTA, and 0.1% BSA. Liver mitochondria (LM) were isolated by conventional differential centrifugation with a final spin at 8,600 g (40). Brain mitochondria were isolated from the pooled forebrains of three rats. We used the modified method of Sims (53) to isolate and purify brain mitochondria (BM) in a Percoll gradient. The modifications were as follows: brain tissue was homogenized with 15 strokes of a loose pestle in a Dounce homogenizer, and 5-ml volumes per tube of 15%, 23%, and 40% (vol/vol) of Percoll solutions were used to purify the brain mitochondria. After the final sedimentation of mitochondria at 8,600 g, the mitochondria were suspended in 250 mM sucrose and 10 mM MOPS (pH 7.2). Mitochondrial protein was determined using the Pierce Coomassie protein assay reagent kit.
Registration of PT and estimation of Ca2+ retention capacity. Recently, we introduced a quantitative parameter, Ca2+ retention capacity (CRC) that allows a meaningful comparison of the sensitivity to Ca2+ of mitochondria from different organs and species (39). CRC is the amount of Ca2+ that can be accumulated and retained by mitochondria until the PT occurs. It is expressed as nanomoles of Ca2+ per mg of mitochondrial protein. Ca2+ was added to 2 ml of mitochondrial suspensions (0.5 mg/ml) using aliquots of 5, 10, or 20 mM stock solutions of CaCl2 to achieve final concentrations of Ca2+ of 12.5, 25, or 50 nmol/ml. At high CRC we switched to higher concentration of the CaCl2 stock solutions to minimize volume changes. We utilized CaCl2 of very high purity: 99.99% from Sigma.
The following three different methods were used to estimate CRC and PT.
First, potentiometric measurement of pH changes of the incubation medium during Ca2+ accumulation and release by the mitochondria, as described in Ref. 39. The pH measurements were performed with the use of a pH meter (model 440, Corning) equipped with a mono pH microelectrode from Lazar and an Ag/AgCl reference electrode connected to the incubation chamber by a KCl bridge.
Second, depolarization of mitochondria was registered by determining membrane potential (
) with a tetraphenyl phosphonium (TPP+)-sensitive electrode as described elsewhere (44). Because the volume of the matrix space and binding constants for TPP+ in brain mitochondria and mouse liver mitochondria are unknown, the 
values presented are approximate, and show only the dynamics and direction of 
changes.
Finally, swelling of mitochondria, registered as a decrease in optical density, was recorded at 545 nm using a Shimadzu spectrophotometer (Multispec model 1501). We measured simultaneously 23 parameters in mitochondria in various combinations.
The mitochondrial CRC and swelling were estimated in a medium (medium B) containing (in mM) 125 KCl, 10 NaCl, 0.5 MgCl2, 3 glycyl-glycine, pH 7.2, 1 KH2PO4, and 20 glutamate plus malate 2 for brain and liver mitochondria. Mitochondrial protein was 0.5 mg/ml. The composition of medium B used in the present study to measure CRC is different from the sucrose-based medium we used in our previous studies (39, 40). We have found that the sucrose-based medium with only 20 mM KCl and absence of Mg2+ may inhibit maximal respiratory activities of the brain mitochondria (A. Panov et al., unpublished observations). Therefore, the current composition of the medium for measuring CRC only minimally differs from the medium A, which is optimal for maximal respiratory rates of brain mitochondria (40). We have found that the current composition of medium B, compared with the sucrose-based medium, gives somewhat higher and better reproducible values of CRC for the same type of brain mitochondria.
At the end of an experiment, the addition of 125 nmol/ml H+, that caused a
pH of 0.07 pH units, served as an internal calibration. This allowed a comparison of the total pH changes and calculation of the H+/Ca2+ ratios. Similarly, additions of 0.5 µM TPP+ aliquots served as internal calibration for membrane potential changes. In experiments with liver mitochondria the final concentrations of TPP+ were 1.5 µM, with brain mitochondria 2 µM.
To determine maximal amplitudes of the mitochondrial swelling and complete release of CaPi from the mitochondria after mPT, we added a bacterial toxin, alamethicin (5 µg/mg mitochondrial protein). Alamethicin forms a large conductance pore for low molecular mass hydrophilic substrates (21).
Measurements of H2O2 generation.
H2O2 was determined using Amplex red (Molecular Probes) method. In the presence of horseradish peroxidase, the following reaction occurs: Amplex red + H2O2
resorufin + O2. Resorufin is a stable and highly fluorescent compound with a wavelength spectra excitation/emission of 570/585 nm. The fluorescence of resorufin was determined in 1-ml incubations in a medium (medium A) containing (in mM) 125 KCl, 10 MOPS, pH 7.2, 2 MgCl2, 2 KH2PO4, 10 NaCl, 1 EGTA, 0.7 CaCl2, and 0.2 mg/ml mitochondrial protein, 5 µM Amplex red, and 3 units of horseradish peroxidase, as described in Ref. 40. At the EGTA/Ca2+ ratio of 1/0.7 the concentration of free [Ca2+] was close to 1 µM, as determined with the Fura-2 method. We measured H2O2 production in the presence of glutamate 20 mM + malate 2 mM, or succinate 5 mM. When present, the respiratory inhibitors and uncoupler were added to the incubation media prior to addition of mitochondria. Additions of 50 nM of resorufin or correspondingly diluted standard 3 mM solution of H2O2 (Fluka) were used for calibration of the fluorescence scale. The background fluorescence was subtracted from experimental fluorescence, and the scale between 4,000 and 6,000 fluorescence arbitrary units, which corresponded to 44 nM of H2O2 or resorufin, was used in calculations. There was a very close correlation between the fluorescence of freshly diluted H2O2 standard solution and the resorufin standard. However, H2O2 solutions decayed rapidly while resorufin solutions remained stable for a long time. Fluorimetric measurements were made using a fluorometer from C&L (Middletown, PA; www.fluorescence.com).
Data acquisition. The data acquisition was performed using hardware and software from C&L.
Chemicals. Chemicals were of highest purity available. All solutions were made using glass-bidistilled water.
Statistics. Data are presented as means ± SE of 46 separate experiments. For comparison of two groups, a two-tailed t-test was employed using Microsoft Excel software. Statistical significance was assumed when P < 0.05.
| RESULTS |
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, Ca2+ accumulation registered with the pH method (39) and optical density changes of the RLM (Fig. 1A) and MLM (Fig. 1B) during titration with calcium. The figures show that with RLM and MLM depolarization and slow rate swelling began before the large pore opening registered as alkalization of the medium (see also Ref. 39) clearly designating the moment of a large pore opening. These pH changes are bound to a dissociation of Ca2+ phosphate salts deposited in the matrix and binding of protons to the released HPO42 and PO43 anions to accommodate the medium's pH (15, 39).
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and alkalization occurred simultaneously. This indicates that unlike unprotected liver mitochondria that can acquire three conformational states: closed, low-conductance, and high-conductance states (39), the protected mitochondria have only closed and open high conductance states.
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The unprotected mouse brain mitochondria (MBM) did not change their optical density (OD) during incubation or addition of Ca2+ aliquots (Fig. 3B). When the large pore opened, as indicated by the collapse of 
and alkalization of the medium, the swelling of MBM also began, but the amplitude of swelling was small (0.2 OD). Unlike RBM, the opening of mPTP in MBM was transient and stopped spontaneously (see Fig. 3B), and was reopened again after addition of cyanide m-chlorophenylhydrazine (CCCP). This effect of CCCP was not associated with mitochondrial deenergization, but by the uncoupler directly promoting opening of mPTP (51). Figure 5, A and B, show that unprotected MBM sequestered two times (P < 0.001) more Ca2+ before opening of mPTP than RBM.
When RBM and MBM were protected with ADP (plus oligomycin) the RBM sequestered almost 5-fold and MBM 3-fold more CaPi than the unprotected brain mitochondria. ADP-protected MBM sequestered 70% (P < 0.001) more CaPi than the RBM (Fig. 5, A and B). As with the rat and mouse liver mitochondria, the RBM and MBM protected with CsA + ADP sequestered the same amounts of CaPi (Fig. 5, A and B). In the RBM and MBM protected with ADP (not shown) or CsA + ADP (Fig. 4, A and B), collapse of membrane potential, alkalization of the medium and swelling occurred simultaneously. Before the opening of mPTP, the optical density of RBM and MBM may be noticeably increased, evidently due to sequestration of the optically dense CaPi salts. 
remained relatively stable. The amplitudes and the rates of swelling of the RBM and MBM after opening of mPTP were significantly larger than in the unprotected mitochondria.
H+/Ca2+ ratios during Ca2+ and phosphate accumulation by mitochondria. Chalmers and Nicholls (15) suggested that the H+/Ca2+ ratio, the ratio of the net H+ extruded to the number of Ca2+ ions accumulated, reflects the type of the CaPi salt sequestered by the mitochondria. A decrease in the H+/Ca2+ ratio would mean that more CaPi is sequestered as CaHPO4 x 2H2O, which is relatively soluble. An increase in the H+/Ca2+ ratio to 1.0 would indicate that more CaPi is sequestered as Ca3(PO4)2, which is 15.9 times less soluble than the CaHPO4 salt (17).
In the experiments presented in this paper for Sprague-Dawley rats (Figs. 1A4A) and C57Bl/6J mice (Figs. 1B4B), the H+/Ca2+ ratios for unprotected RLM and MLM were 0.77 ± 0.01 and 0.79 ± 0.01 correspondingly. When liver mitochondria were protected with CsA + ADP + oligomycin, the H+/Ca2+ ratio of both RLM and MLM increased after the first few additions of Ca2+ to 0.97 ± 0.02. With unprotected RBM and MBM, the H+/Ca2+ ratios were correspondingly 0.83 ± 0.01 and 0.85 ± 0.02. With protected brain mitochondria, the H+/Ca2+ ratio during titration with Ca2+ increased rapidly to 1.0 showing that CaPi was sequestered as almost insoluble Ca3(PO4)2. Thus sequestration of CaPi is a highly dynamic process and can vary depending on the type of mitochondria and incubation conditions. Our data show that relatively small changes in the H+/Ca2+ ratios may result in large changes in the amounts of Ca2+ sequestered by the mitochondria.
Effects of PT modifiers on CRC. It is well established that the addition of 200 µM t-BOOH to RLM significantly decreases the amount of Ca2+ necessary to open mPTP (12, 61). However, we have found that t-BOOH was ineffective with MLM. CRC of the MLM remained at the control level even in the presence of 1 mM t-BOOH (not shown). RBM and MBM were also insensitive to the presence of this hydroperoxide (not shown). These results indicate that in RLM mPT is radically different compared with RBM, MBM, and MLM.
To analyze the properties of mPTP in rat and mouse liver and brain mitochondria, we used various compounds that are known to affect mPT. Figure 5, A and B, show that in the absence of mPT modifiers mouse brain and liver mitochondria sequester considerably (P < 0.001) more CaPi than the corresponding rat mitochondria. Both rat and mouse brain mitochondria were much more sensitive to the protective effect of ADP than CsA alone. In the presence of ADP+CsA, however, there was no difference in CRC values between the rat and mouse mitochondria. Brain mitochondria sequestered two times more CaPi than the liver mitochondria.
Mitochondrial generation of ROS.
Most mitochondria have active superoxide dismutase, both in the matrix (Mn2+-SOD) and in the intermembrane space (Cu2+-Zn2+-SOD), therefore it is impossible to study intramitochondrial ROS production by following extramitochondrial O2
released by intact mitochondria (40, 55). The best way to follow generation of O2
in intact mitochondria is to determine formation of H2O2 (40, 55). In this study we used the Amplex red method and a highly sensitive fluorometer as described (40).
Generation of ROS by liver mitochondria. With RLM and MLM oxidizing succinate or glutamate + malate, there was almost no difference in the rates of H2O2 generation (correspondingly 92.1 ± 4 and 80 ± 4 pmol H2O2·min1·mg protein1), which was in stark contrast to the 4- to 6-fold difference between the two substrates in RBM and MBM shown in Figs. 6 and 7. We have also found that with the exception of antimycin A, addition of respiratory inhibitors rotenone, myxothiazol, and their combinations to LM had no effect on the observed rates of H2O2 production (not shown, see also Ref. 40). As we have suggested and explained earlier (40), measurements of the extramitochondrial H2O2 cannot be used for analysis of ROS generation by the intact liver mitochondria.
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Figure 6A shows that with glutamate + malate, the rate of ROS generation by BM was the same in the energized and in the uncoupled mitochondria, when membrane potential was collapsed. Thus with glutamate or pyruvate (not shown) as a substrate generation of ROS does not depend on mitochondrial energization.
Upon addition of rotenone there was a 4- to 5-fold increase in ROS generation (Fig. 6, A and B). Upon addition of antimycin A or myxothiazol, there was correspondingly a 5.5-fold and 3.3-fold increase in generation of ROS. A significantly larger effect of antimycin A indicates that some of the ROS was generated on complex III. With myxothiazol, which prevents reduction of the CoQ centers on complex III, and thus abolishes the effect of antimycin A, evidently all of the ROS was generated on Complex I. MBM generate (80 pmol H2O2/mg protein), that is 62% more ROS (P < 0.001) than RBM (49.3 pmol H2O2/mg protein) in metabolic state 4 (Fig. 6B); however, there was no difference in ROS production between MBM and RBM in the presence of rotenone or uncoupler CCCP. In the presence of myxothiazol or antimycin A, MBM generated more ROS than the RBM. The mechanism of this difference is unclear.
Figure 7A shows representatively how brain mitochondria respond to CCCP and respiration inhibitors when ROS generation was supported by succinate. Figure 7B gives a quantitative comparison of ROS generation by RBM and MBM. Figure 7B shows that under all conditions there was no difference between the two species in the rates of ROS production by BM oxidizing succinate. The addition of rotenone to BM inhibited ROS production by
80%. However, energization of the mitochondria was preserved. Antimycin A also inhibits respiration and energization of the mitochondria and thus prevents backward electron flow. However, in the presence of antimycin A, the CoQ sites of complex III become reduced and thus increase O2
generation (35). Because the CoQO site of complex III is located close to the outer surface of the inner mitochondrial membrane, a large portion of O2
is released from the mitochondria (35, 60). This is one reason why antimycin A dramatically increases generation of ROS with succinate as a substrate. The other reason for the 4- to 5-fold increase in ROS generation may be explained by the fact that mitochondria have 3 times more complexes III than complexes I (23, 49). Thus in the presence of antimycin A most of O2
was generated on complex III.
Myxothiazol, which inhibits respiration and prevents reduction of the complex III CoQ sites, also caused deenergization of the mitochondria and thus inhibited the energy-dependent backward electron flow driven by succinate. As a result, production of ROS was at the same level as with rotenone. In the presence of rotenone and myxothiazol, the electrons from the membrane pool of CoQ reduced by succinate cannot go downstream to complex III, or upstream because mitochondria are de-energized and rotenone would block reduction of the complex I redox sites. Therefore, in the presence of rotenone + myxothiazol generation of ROS may occur only on complex II (40). Figure 7, A and B, show that with rotenone, myxothiazol, or rotenone + myxothiazol, the rates of ROS production were practically the same, and thus complex II was responsible for this basic rate generation of ROS. When CCCP was added to mitochondria oxidizing succinate, the rate of ROS production was the same or lower than that observed in the presence of rotenone and myxothiazol.
Taken together, the data show that generation of ROS is strongly substrate dependent. With the NAD-dependent substrates, generation of ROS does not depend on mitochondrial energization or the functional state of the mitochondria, whereas with succinate it does. Importantly, with the NAD-dependent substrates MBM during resting respiration generate 50% more ROS than RBM (Fig. 6B).
Simultaneous measurements of ROS generation and mPTP opening. It was suggested by some researchers that mPT stimulates ROS generation by the mitochondria (14, 32). Figure 8 shows simultaneous registration of ROS generation and the Ca2+-induced mPT in RBM oxidizing either glutamate + malate (Fig. 8A) or succinate (Fig. 8B). Similar results were obtained with MBM (not shown). With glutamate + malate there was a slight inhibition of ROS generation during active Ca2+ consumption, which again slightly increased to the initial level upon opening of mPTP. These changes in the rate of ROS generation were small. Thus with the NAD-dependent substrates mPT does not affect dramatically the rate of ROS generation.
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| DISCUSSION |
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, but mitochondrial deenergization does not always results in opening of mPTP (4, 39, 42). Regarding BM, there is still controversy as to whether mPT causes mitochondrial swelling or not, and the role of swelling in cytochrome c release (10, 15, 28, 64). We studied brain mitochondria from several strains of rats and mice and found that in the absence of mPT modifiers, BM from several species do not spontaneously open mPTP and do not undergo swelling (39). In general, the amplitudes of swelling of the unprotected brain mitochondria were not large, evidently not enough to rupture the outer membrane (39). This suggestion agrees with the observation made by Andreev and Fiskum (2) that unlike RLM, in RBM, cytochrome c was released by the mPT-independent mechanism. In the presence of ADP, which is a more physiological condition because ADP is always present in a cell, brain mitochondria sequester several times more CaPi (see Fig. 5, A and B) and always undergo mPT and large amplitude of swelling. We believe that in this case cytochrome c release may be associated with mPT as suggested in (10). Thus, it is very likely that the roles of mPT in cytochrome c release and initiation of apoptosis may depend on the species specific intrinsic properties of BM, as well as on assay conditions. Figures 5, A and B, show that both unprotected and ADP protected MBM require correspondingly two times and 70% more Ca2+ to open mPTP than RBM under the same conditions. This might be associated with the fact that MBM have slightly higher H+/Ca2+ ratios than RBM during CaPi sequestration. We have shown that even small changes in the H+/Ca2+ ratios dramatically change the CRC values (see also Ref. 7). A very large effect of ADP (plus oligomycin) on the CRC of BM (see Fig. 5, A and B) is bound to a decrease in the mitochondrial conductivity for H+ and K+ ions due to a change in the conformational state of ANT (39, 41). Decreased proton conductivity promotes mitochondrial energization, increases the H+/Ca2+ ratio, and thus increases the ability of mitochondria to sequester more CaPi (39, 41). The liver mitochondria have a relatively small amount of ANT (reviewed in Ref. 38) compared with mitochondria from other organs, and therefore the protective effect of ADP is small.
Brain mitochondria require additional insults to induce mPT. Because ADP is always present in a cell, we suggest that under in situ conditions the BM may sequester very large amounts of CaPi. In the presence of ADP, RBM sequester 867 ± 33, and MBM sequester 1,473 ± 79 nmol Ca2+/mg protein (see Fig. 5, A and B). Thus normally BM can withstand very large calcium insults without detrimental consequences for the neurons. However, if the cell and/or mitochondria were predisposed to mPT by some other hazardous effect, such as inhibition of the respiratory chain or oxidative stress, the detrimental events may occur. This ability of normal BM to withstand large calcium insults may explain the fact that in most neurodegenerative diseases clinical manifestations of a disease develop well after midlife when mitochondria have undergone significant oxidative stress associated with the aging process (34).
We have found that both rat and mouse BM and, surprisingly, MLM are insensitive to the oxidative stress caused by a peroxide tBOOH, which is in stark contrast with RLM (14). The mechanism of this BM and MLM resistance to this peroxide remains unclear. However, this fact suggests that the damaging effects of peroxides are much less general than was indicated earlier (14). Evidently, different species of ROS responsible for oxidative stress may vary in their mechanisms, and their adverse effects depend on the animal species and the type of mitochondria.
Because neuronal cells have very high respiratory activity and have a large life span (59), prevention of increased ROS generation by brain mitochondria is of paramount biological importance. There have to be evolutionary mechanisms present to lessen or prevent oxidative stress. One of these mechanisms is represented by the cytoplasmic and mitochondrial enzymatic and metabolic antioxidant defenses, such as catalase, SODs, glutathione reductases, and vitamin E, which vary from tissue to tissue (33). Because liver mitochondria have a relatively high antioxidant system, including catalase, this may explain why it is difficult to study generation of ROS in intact liver mitochondria (39).
Here we will outline the intrinsic mitochondrial structural mechanisms to minimize ROS production. For some reasons, these mechanisms have missed the attention of researchers who study oxidative stress, but the factual basis for our discussion was laid down by researchers in other fields of mitochondrial biology (23, 49).
Generation of ROS in brain mitochondria.
In mitochondria, ROS can potentially be formed spontaneously at any protein involved in redox reactions, that may have a group capable of one electron-reduced state, such as ubiquinone and transition metals (1, 25). Currently, many authors consider semiubiquinones of the respiratory chain Complex I and Complex III as the major sources of O2
(13, 25). Recently, it was shown that mitochondrial
-ketoglutarate dehydrogenase can generate ROS (56). However, there is no consensus regarding both the sites and regulation of ROS generation under normal in situ conditions.
In many studies the authors designate the role of a respiratory chain component in oxidative stress by the ability of this component to generate ROS in the presence of a specific inhibitor. For example, antimycin A dramatically increases generation of O2· at Complex III in mitochondria oxidizing succinate, therefore some authors consider Complex III as one of the major sites of ROS production (35). The inhibitors show us only a potential capacity of a given respiratory component to generate ROS in the presence of this inhibitor. Some pathological situations may be compared with the effects of inhibitors. For example, hypoxia may resemble effects of rotenone or antimycin A, and the loss of cytochrome c after opening of mPTP may resemble the effect of antimycin A on ROS generation (29). But these are not normal, physiological situations. Under "normal or physiological conditions" we understand situations when mitochondria function in the absence of added inhibitors at and between the metabolic state 3 in an activated neuron, and closer to metabolic state 4 in a quiescent cell.
Supercomplexes of mitochondrial respiratory chain and ROS generation. From our earlier experiments we have concluded that pyruvate and also glutamate are the best substrates for brain mitochondria (39). This agrees with the current view that the major energy substrate for the brains of adult mammals is glucose (19). Moreover, recent research showed that there are complex interactions between astroglia and neuronal cells designed to optimize energy supply in the form of lactate for activated neurons (reviewed in Refs. 19 and 45).
In Fig. 6, we have shown that both in the energized and de-energized brain mitochondria the rates of ROS generation were at the same relatively low level (5060 pmol·min·1 mg protein1 measured as H2O2). Thus with the NAD-dependent substrates the rate of ROS generation does not depend on the energy state of mitochondria. Only when the electron flow was prevented by any of the respiratory inhibitors did the generation of ROS increase several folds due to increased reduction of the CoQ sites of Complex I.
That ROS generation in BM oxidizing NAD-dependent substrates is at minimum and does not depend on the energy state of the mitochondria can be explained by the assumption that all mitochondrial components, which potentially can generate ROS, are maintained in the oxidized state. Evidently, the steady low level of ROS generation occurs at the initial rate-limiting step which is more likely either FMN or the (2Fe-2S)N1a center of Complex I. We suggest that oxidation of the Fe-S clusters and CoQ centers in Complexes I and III is ensured by the superstructure of the respiratory chain.
It was shown that for the heart mitochondria the ratio for oxidative phosphorylation (OXPHOS) complexes I:II:III:IV:V is 1:2:3:67:35 (23), or more recently determined as 1:1.5:3:6:3 (37). The respiratory complexes interact with each other to form a supercomplex named the respirasome (49). On the basis of the above ratios of the OXPHOS complexes, Schägger et al. (49) suggested that the respirasome exists as a mixture of two large supercomplexes and one smaller complex. Each of the two large supercomplexes are comprised of a Complex I monomer, a Complex III dimer, and four copies of Complex IV. The smaller supercomplex contains two of Complex III and four of Complex IV (49, 50). The major advantages of the supercomplex structure of the mitochondrial respiratory chain are substrate channeling, catalytic enhancement, sequestration of reactive intermediates and structural stabilization (49, 50). The advantage of the substrate channeling is the use of localized substrate molecules, for example, quinone and cytochrome c, which can react independently of bulk properties of a quinone or cytochrome c pool (49).
We suggest that in addition to the benefits listed above, the respirasome is also an evolutionary adaptive mechanism designed to prevent excessive production of ROS. Evidently, this mechanism developed early during the evolution of the aerobic organisms because it is available in aerobic bacteria and yeast (49, 50). The initial reaction of NADH with the FMN of the Complex I is the rate limiting step in oxidation of the NAD-dependent substrates. The suggested composition of the respirasome ensures that all components proximal to Complex IV, which is in a 4-fold excess of Complex I, are kept oxidized regardless of the energy state of the mitochondria. In brain mitochondria, which respire at rates similar or even higher than heart mitochondria, the composition of the respirasome should be similar to that reported for beef heart mitochondria (49, 50).
Recently, we have found that unlike RLM, brain mitochondria have no intramitochondrial substrate storage pool (A. V. Panov, unpublished observations). This may represent yet another adaptive mechanism to minimize generation of ROS when brain mitochondria are inactive or de-energized.
Possible control of succinate-driven ROS generation.
In Fig. 7, we have shown that in the energized brain mitochondria the rate of ROS generation with succinate is 46 times higher than with an NAD-dependent substrate. Inhibitor analysis showed that
80% of the total ROS with succinate is generated on Complex I. This conclusion agrees with previously published papers (40, 60, 63). Approximately 20% of the total ROS produced by the BM oxidizing succinate was independent of mitochondrial energization, and occurred on Complex II, presumably on the FAD moiety of the enzyme (40). As is shown in Figs. 6 and 7, in the absence of antimycin A there was no generation of ROS on Complex III whether BM oxidized glutamate or succinate.
Because in the presence of rotenone, rotenone + myxothiazol, and CCCP, the rates of ROS production are virtually the same, we may conclude that this basic level of superoxide generation occurs on Complex II, which does not depend on the energy state of the mitochondria. On the basis of the results of inhibitor analysis, we can also conclude that Complex III does not generate O2
in energized and de-energized BM. Complex III generates ROS only in the presence of antimycin A (Fig. 7, A and B; see also Ref. 37). The general agreement is that when energized mitochondria oxidize succinate, most of the ROS is generated on CoQ centers of Complex I that become reduced due to the energy-dependent backward electron flow (40, 61, 63).
In situ, when brain mitochondria utilize pyruvate or glutamate as respiratory substrates, succinate is formed during the functioning of the TCA cycle. Succinate dehydrogenase (SDH) is the only TCA cycle enzyme that is also part of the mitochondrial electron transport chain, designated as Complex II. During oxidation of succinate to fumarate complexes II feed electrons into the mitochondrial pool of CoQ with such a force (redox potential E = +90 mV; Ref. 37) that electrons can go not only downstream to Complex III, but also upstream reducing components of the Complex I (40, 61, 63). This catalyzed Complex II oxidation of succinate is an irreversible reaction, at least in mammalian mitochondria. Coupling of the SDH/Complex II to the thermodynamically irreversible electron transport reactions of the respiratory chain makes the TCA cycle also work irreversibly in the clockwise direction to ensure utilization of pyruvate and other intermediates as the source of hydrogen. However, the stoichiometric formation of succinate as a TCA cycle intermediate raises the question of how brain mitochondria protect themselves from excessive ROS generation when a neuronal cell is at rest and mitochondria become more energized?
Schagger et al. (49, 50), using a BN-PAGE method, and Bianchi et al. (7), using a flux control analysis, did not observe stable binding of Complex II to Complexes III and IV. However, other researchers, using different methods, isolated functional Complexes II and III (62). In submitochondrial particles prepared by sonication of the mitochondria, the activity of Complexes II and III can be readily assessed (58), although the SDH activity becomes almost totally inhibited (43). Schagger (49) suggested that Complex II and other FAD-dependent dehydrogenases can contact the smaller supercomplex comprising Complexes III and IV, which functions as a sink for electrons provided by the membrane pool of reduced CoQ.
We suggest further that because brain mitochondria do not have a storage pool of the TCA cycle intermediates (A. V. Panov, unpublished data), in active mitochondria the steady-state concentrations of the mitochondrial substrates, including succinate, must be also low. Thus unlike artificial in vitro experimental conditions, when brain mitochondria oxidize mM concentrations of succinate, the in vivo succinate concentrations must be low, and therefore the rates of reduction of the membrane pool of CoQ may be lower, compared with the rate of its oxidation by the smaller superstructure of Complexes IIIV. Therefore the succinate-driven backward electron flow could be prevented. In addition, brain mitochondria in vivo may never be in the highly energized state as in the in vitro state 4. Thus channeling of the substrate utilization by the respirasome increases the efficiency of mitochondria and prevents excessive production of ROS. In addition, our preliminary data have shown that there may be other means of suppression of the succinate-supported ROS generation that involve metabolic control over SDH activity. This suggestion requires further investigation.
Summary of species-specific differences in brain and liver mitochondria.
Altogether, the data presented show that the observed differences in the Ca2+-induced mPT and ROS generation may underlie the organ and species-specific differences observed in animal models of neurodegenerative diseases. Interestingly, short-living liver cells and long-living neuronal cells have different strategies towards the Ca2+-induced mPT and ROS generation. Liver cells have strong antioxidant defense against ROS that were formed in the mitochondria (16). Whole liver mitochondria release very little O2
and H2O2 (40). Because liver mitochondria have much lower Ca2+ capacities, they evidently undergo mPT, followed by apoptosis much easier than brain mitochondria. Elimination of damaged hepatocytes and replacement with the new healthy cells is evidently the reason why during systemic intoxication of animals with a toxin the liver mitochondria remain almost normal (40). This probably reflects the high regenerative potential of the liver. Brain mitochondria, on the other hand, have "chosen" a strategy to prevent generation of ROS. In the brain, which has negligible regenerative potential and a very long life span, mitochondria can withstand enormous Ca2+ insults (see Fig. 5, A and B). Therefore, we suggest that interactions between ROS generation and mechanisms of CaPi sequestration determine responses to pathological situations in animal models of neurodegenerative diseases.
However, the relationships between these functions require further investigation. Mouse brain mitochondria, for example, generate 50% more ROS with the NAD-dependent substrates than RBM, but required 70% more Ca2+ to undergo mPT. Quite unexpected was the insensitivity of MLM to t-BOOH, which dramatically decreases the amount of Ca2+ that cause mPT in RLM. Evidently, other strains of mice and rats may have different parameters of intrinsic mitochondrial functions. Further quantitative studies may help to reveal the subtle functional mechanisms that determine the animal's sensitivity to a pathogenic factor when modeling a neurodegenerative disease.
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